Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC22.21■■□□□ 1.15
Trim41Q5NCC3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Trim41Q5NCC3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
Trim41Q5NCC3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Gm12969-201ENSMUST00000120199 1004 ntBASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Gm8325-201ENSMUST00000099086 453 ntBASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim41Q5NCC3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm25700-201ENSMUST00000177693 110 ntBASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Mir6923-201ENSMUST00000184592 72 ntBASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm3096-201ENSMUST00000185770 364 ntBASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Gm38577-201ENSMUST00000221531 4545 ntBASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim41Q5NCC3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm2673-201ENSMUST00000120958 1608 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm14109-201ENSMUST00000118814 309 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm8018-201ENSMUST00000173536 789 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Mir3060-201ENSMUST00000175339 83 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm8492-201ENSMUST00000182375 987 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm6546-201ENSMUST00000192096 766 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 AC166992.1-201ENSMUST00000216356 565 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm8712-201ENSMUST00000221090 701 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Acot6-202ENSMUST00000222921 3622 ntBASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trim41Q5NCC3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC22.17■■□□□ 1.14
Trim41Q5NCC3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Gm43778-201ENSMUST00000199438 199 ntBASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Gm19287-201ENSMUST00000203190 358 ntBASIC22.17■■□□□ 1.14
Trim41Q5NCC3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms