Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm22058-201ENSMUST00000083393 310 ntBASIC11.8□□□□□ -0.52
Urb1Q571H0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Urb1Q571H0 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.8□□□□□ -0.52
Urb1Q571H0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Urb1Q571H0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Urb1Q571H0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Urb1Q571H0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm8913-201ENSMUST00000209491 641 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm10051-201ENSMUST00000145209 414 ntBASIC11.79□□□□□ -0.52
Urb1Q571H0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Urb1Q571H0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Urb1Q571H0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Urb1Q571H0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.78□□□□□ -0.52
Urb1Q571H0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.78□□□□□ -0.52
Urb1Q571H0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.78□□□□□ -0.52
Urb1Q571H0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.78□□□□□ -0.52
Urb1Q571H0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.78□□□□□ -0.52
Urb1Q571H0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.78□□□□□ -0.52
Urb1Q571H0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Urb1Q571H0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.77□□□□□ -0.52
Urb1Q571H0 Gm26361-201ENSMUST00000158868 186 ntBASIC11.77□□□□□ -0.52
Urb1Q571H0 Gm9540-201ENSMUST00000188230 478 ntBASIC11.77□□□□□ -0.52
Urb1Q571H0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Urb1Q571H0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Urb1Q571H0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.77□□□□□ -0.52
Urb1Q571H0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Urb1Q571H0 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms