Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm12058-201ENSMUST00000118614 437 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm25043-201ENSMUST00000158604 212 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm26956-201ENSMUST00000182176 986 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.78□□□□□ -0.04
Rc3h1Q4VGL6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rc3h1Q4VGL6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Gm31256-201ENSMUST00000194705 506 ntBASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Gm45925-201ENSMUST00000218882 744 ntBASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rc3h1Q4VGL6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms