Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.87□□□□□ -0.35
Zfp560Q3URI6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Gm22121-201ENSMUST00000175148 54 ntBASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.87□□□□□ -0.35
Zfp560Q3URI6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.86□□□□□ -0.35
Zfp560Q3URI6 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zfp560Q3URI6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Gm23363-201ENSMUST00000175024 79 ntBASIC12.85□□□□□ -0.35
Zfp560Q3URI6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.85□□□□□ -0.35
Zfp560Q3URI6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Zfp560Q3URI6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms