Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa3Q3UPR0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Shisa3Q3UPR0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.08□□□□□ -0.64
Shisa3Q3UPR0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms