Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm11930-201ENSMUST00000117788 190 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm15547-201ENSMUST00000122152 333 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx27Q3UHD6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm24830-201ENSMUST00000102024 166 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm15703-201ENSMUST00000120250 880 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm13315-201ENSMUST00000120376 991 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm25890-201ENSMUST00000177643 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm22614-201ENSMUST00000178300 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm27023-201ENSMUST00000182372 285 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm22042-201ENSMUST00000082989 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm26232-201ENSMUST00000083360 166 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm24136-201ENSMUST00000083374 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm26110-201ENSMUST00000083971 165 ntBASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx27Q3UHD6 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx27Q3UHD6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms