Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm2445-201ENSMUST00000182798 989 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm42430-201ENSMUST00000197209 616 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm43531-201ENSMUST00000200676 1114 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm6450-201ENSMUST00000200896 574 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 AC154515.3-201ENSMUST00000225081 1159 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm5605-201ENSMUST00000208940 1305 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm7851-201ENSMUST00000117574 323 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm11834-201ENSMUST00000122257 585 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm9507-202ENSMUST00000180157 654 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.72□□□□□ -0.37
Col9a1Q05722 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm43854-201ENSMUST00000200418 394 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm17910-201ENSMUST00000211038 838 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Gm21089-201ENSMUST00000215843 325 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col9a1Q05722 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.72□□□□□ -0.37
Col9a1Q05722 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col9a1Q05722 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col9a1Q05722 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col9a1Q05722 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a1Q05722 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col9a1Q05722 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a1Q05722 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms