Protein–RNA interactions for Protein: Q02780

Nfia, Nuclear factor 1 A-type, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfiaQ02780 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NfiaQ02780 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.28□□□□□ -0.12
NfiaQ02780 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm7003-201ENSMUST00000195089 312 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 Gm43378-201ENSMUST00000199336 582 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.28□□□□□ -0.12
NfiaQ02780 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.28□□□□□ -0.12
NfiaQ02780 Acot6-202ENSMUST00000222921 3622 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NfiaQ02780 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm10312-201ENSMUST00000078515 489 ntBASIC14.28□□□□□ -0.12
NfiaQ02780 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NfiaQ02780 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.27□□□□□ -0.12
NfiaQ02780 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.27□□□□□ -0.12
NfiaQ02780 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.27□□□□□ -0.12
NfiaQ02780 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NfiaQ02780 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfiaQ02780 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.27□□□□□ -0.13
NfiaQ02780 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.27□□□□□ -0.13
NfiaQ02780 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Gm43930-201ENSMUST00000203868 845 ntBASIC14.27□□□□□ -0.13
NfiaQ02780 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.27□□□□□ -0.13
NfiaQ02780 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.27□□□□□ -0.13
NfiaQ02780 Gm29787-201ENSMUST00000222129 849 ntBASIC14.27□□□□□ -0.13
NfiaQ02780 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.27□□□□□ -0.13
NfiaQ02780 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NfiaQ02780 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.27□□□□□ -0.13
NfiaQ02780 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfiaQ02780 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.26□□□□□ -0.13
NfiaQ02780 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NfiaQ02780 Gm13296-201ENSMUST00000117854 997 ntBASIC14.26□□□□□ -0.13
NfiaQ02780 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.26□□□□□ -0.13
NfiaQ02780 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.26□□□□□ -0.13
NfiaQ02780 Gm24845-201ENSMUST00000158034 109 ntBASIC14.26□□□□□ -0.13
NfiaQ02780 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
NfiaQ02780 Gm8018-201ENSMUST00000173536 789 ntBASIC14.26□□□□□ -0.13
NfiaQ02780 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.26□□□□□ -0.13
NfiaQ02780 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfiaQ02780 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms