Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.99■□□□□ 0.15
Nkx2-3P97334 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gm23119-201ENSMUST00000158610 140 ntBASIC15.98■□□□□ 0.15
Nkx2-3P97334 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gm5369-201ENSMUST00000217499 588 ntBASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gm29787-201ENSMUST00000222129 849 ntBASIC15.98■□□□□ 0.15
Nkx2-3P97334 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.98■□□□□ 0.15
Nkx2-3P97334 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-3P97334 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.97■□□□□ 0.15
Nkx2-3P97334 Mir1943-201ENSMUST00000158276 73 ntBASIC15.97■□□□□ 0.15
Nkx2-3P97334 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-3P97334 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.97■□□□□ 0.15
Nkx2-3P97334 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm14760-201ENSMUST00000121831 999 ntBASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm18734-201ENSMUST00000172937 808 ntBASIC15.96■□□□□ 0.15
Nkx2-3P97334 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.96■□□□□ 0.15
Nkx2-3P97334 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.96■□□□□ 0.15
Nkx2-3P97334 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms