Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43cP86449 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43cP86449 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43cP86449 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43cP86449 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.92□□□□□ -0.18
Trim43cP86449 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43cP86449 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim43cP86449 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 Gm11964-201ENSMUST00000120982 444 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Gm25927-201ENSMUST00000175058 117 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim43cP86449 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim43cP86449 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim43cP86449 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Trim43cP86449 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.91□□□□□ -0.18
Trim43cP86449 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43cP86449 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm22018-201ENSMUST00000104357 131 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim43cP86449 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm4984-201ENSMUST00000115987 360 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm11425-201ENSMUST00000119608 498 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm9396-201ENSMUST00000076703 567 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.9□□□□□ -0.18
Trim43cP86449 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim43cP86449 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim43cP86449 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43cP86449 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim43cP86449 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.9□□□□□ -0.19
Trim43cP86449 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43cP86449 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43cP86449 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43cP86449 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim43cP86449 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43cP86449 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim43cP86449 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43cP86449 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43cP86449 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43cP86449 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms