Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm12928-201ENSMUST00000117115 573 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm11814-201ENSMUST00000119515 929 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm13829-201ENSMUST00000119600 138 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm15376-201ENSMUST00000122258 783 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm8463-201ENSMUST00000208573 613 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Gm17330-201ENSMUST00000221047 165 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim43bP86448 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim43bP86448 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.19□□□□□ -0.3
Trim43bP86448 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim43bP86448 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43bP86448 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim43bP86448 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trim43bP86448 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim43bP86448 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Gm4984-201ENSMUST00000115987 360 ntBASIC13.18□□□□□ -0.3
Trim43bP86448 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim43bP86448 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Gm42550-201ENSMUST00000201553 960 ntBASIC13.18□□□□□ -0.3
Trim43bP86448 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.18□□□□□ -0.3
Trim43bP86448 Gm18062-201ENSMUST00000208020 547 ntBASIC13.18□□□□□ -0.3
Trim43bP86448 Gm18055-201ENSMUST00000208254 547 ntBASIC13.18□□□□□ -0.3
Trim43bP86448 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trim43bP86448 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim43bP86448 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43bP86448 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43bP86448 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim43bP86448 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43bP86448 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms