Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shox2P70390 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.62□□□□□ -0.39
Shox2P70390 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.62□□□□□ -0.39
Shox2P70390 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.62□□□□□ -0.39
Shox2P70390 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Shox2P70390 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Gm46209-201ENSMUST00000217912 553 ntBASIC12.62□□□□□ -0.39
Shox2P70390 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.62□□□□□ -0.39
Shox2P70390 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.62□□□□□ -0.39
Shox2P70390 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shox2P70390 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.62□□□□□ -0.39
Shox2P70390 BC043934-202ENSMUST00000185694 2356 ntBASIC12.62□□□□□ -0.39
Shox2P70390 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Shox2P70390 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.61□□□□□ -0.39
Shox2P70390 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Shox2P70390 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.61□□□□□ -0.39
Shox2P70390 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.61□□□□□ -0.39
Shox2P70390 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.61□□□□□ -0.39
Shox2P70390 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.61□□□□□ -0.39
Shox2P70390 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.61□□□□□ -0.39
Shox2P70390 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.61□□□□□ -0.39
Shox2P70390 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Shox2P70390 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Shox2P70390 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.61□□□□□ -0.39
Shox2P70390 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shox2P70390 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.61□□□□□ -0.39
Shox2P70390 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Gm12291-201ENSMUST00000121627 311 ntBASIC12.6□□□□□ -0.39
Shox2P70390 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Shox2P70390 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.6□□□□□ -0.39
Shox2P70390 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.6□□□□□ -0.39
Shox2P70390 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.6□□□□□ -0.39
Shox2P70390 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shox2P70390 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms