Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tpm1P58771 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm1P58771 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm1P58771 Gm14701-201ENSMUST00000117156 348 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm1P58771 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm1P58771 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Gm6736-201ENSMUST00000166583 948 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm1P58771 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.28□□□□□ -0.12
Tpm1P58771 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.28□□□□□ -0.12
Tpm1P58771 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm1P58771 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm1P58771 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm1P58771 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tpm1P58771 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Tpm1P58771 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm1P58771 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tpm1P58771 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.27□□□□□ -0.13
Tpm1P58771 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.27□□□□□ -0.13
Tpm1P58771 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm26308-201ENSMUST00000157768 69 ntBASIC14.27□□□□□ -0.13
Tpm1P58771 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm29608-201ENSMUST00000190444 463 ntBASIC14.27□□□□□ -0.13
Tpm1P58771 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm9063-201ENSMUST00000223299 582 ntBASIC14.27□□□□□ -0.13
Tpm1P58771 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.27□□□□□ -0.13
Tpm1P58771 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.27□□□□□ -0.13
Tpm1P58771 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tpm1P58771 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm1P58771 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tpm1P58771 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms