Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.88□□□□□ -0.51
CckbrP56481 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CckbrP56481 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Gm14660-201ENSMUST00000119809 575 ntBASIC11.88□□□□□ -0.51
CckbrP56481 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Snora78-201ENSMUST00000158630 128 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Gm17208-201ENSMUST00000168388 535 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Gm27731-201ENSMUST00000185192 107 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
CckbrP56481 Gm25007-201ENSMUST00000083808 133 ntBASIC11.88□□□□□ -0.51
CckbrP56481 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CckbrP56481 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.88□□□□□ -0.51
CckbrP56481 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CckbrP56481 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.87□□□□□ -0.51
CckbrP56481 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.87□□□□□ -0.51
CckbrP56481 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.87□□□□□ -0.51
CckbrP56481 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CckbrP56481 Gm14704-201ENSMUST00000120300 874 ntBASIC11.87□□□□□ -0.51
CckbrP56481 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.87□□□□□ -0.51
CckbrP56481 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.87□□□□□ -0.51
CckbrP56481 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.87□□□□□ -0.51
CckbrP56481 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.87□□□□□ -0.51
CckbrP56481 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CckbrP56481 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CckbrP56481 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.87□□□□□ -0.51
CckbrP56481 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
CckbrP56481 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CckbrP56481 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CckbrP56481 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms