Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atxn1P54254 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.73□□□□□ -0.37
Atxn1P54254 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.73□□□□□ -0.37
Atxn1P54254 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atxn1P54254 Gm12208-201ENSMUST00000122004 163 ntBASIC12.73□□□□□ -0.37
Atxn1P54254 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.73□□□□□ -0.37
Atxn1P54254 Gm9211-201ENSMUST00000182882 975 ntBASIC12.73□□□□□ -0.37
Atxn1P54254 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.73□□□□□ -0.37
Atxn1P54254 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Atxn1P54254 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Atxn1P54254 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atxn1P54254 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atxn1P54254 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atxn1P54254 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.72□□□□□ -0.37
Atxn1P54254 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm11531-201ENSMUST00000117614 555 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Gm11930-201ENSMUST00000117788 190 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm11597-201ENSMUST00000121423 964 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.72□□□□□ -0.37
Atxn1P54254 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.72□□□□□ -0.37
Atxn1P54254 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.72□□□□□ -0.37
Atxn1P54254 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.72□□□□□ -0.37
Atxn1P54254 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atxn1P54254 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms