Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.11□□□□□ -0.63
TgfaP48030 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TgfaP48030 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.11□□□□□ -0.63
TgfaP48030 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.11□□□□□ -0.63
TgfaP48030 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.11□□□□□ -0.63
TgfaP48030 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.11□□□□□ -0.63
TgfaP48030 Gm9211-201ENSMUST00000182882 975 ntBASIC11.11□□□□□ -0.63
TgfaP48030 Gm32999-201ENSMUST00000192693 562 ntBASIC11.11□□□□□ -0.63
TgfaP48030 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.11□□□□□ -0.63
TgfaP48030 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.11□□□□□ -0.63
TgfaP48030 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TgfaP48030 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TgfaP48030 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.1□□□□□ -0.63
TgfaP48030 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.1□□□□□ -0.63
TgfaP48030 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Gm14921-201ENSMUST00000118643 908 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Gm14999-201ENSMUST00000121039 624 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.1□□□□□ -0.63
TgfaP48030 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Gm6963-201ENSMUST00000147879 379 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TgfaP48030 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Gm8018-201ENSMUST00000173536 789 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.1□□□□□ -0.63
TgfaP48030 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.1□□□□□ -0.63
TgfaP48030 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TgfaP48030 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
TgfaP48030 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.1□□□□□ -0.63
TgfaP48030 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.1□□□□□ -0.63
TgfaP48030 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TgfaP48030 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TgfaP48030 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TgfaP48030 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms