Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.52□□□□□ -0.41
Gli1P47806 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Gm15429-201ENSMUST00000151268 798 ntBASIC12.52□□□□□ -0.41
Gli1P47806 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Gm27731-201ENSMUST00000185192 107 ntBASIC12.52□□□□□ -0.41
Gli1P47806 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Gm37424-201ENSMUST00000191727 561 ntBASIC12.52□□□□□ -0.41
Gli1P47806 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.52□□□□□ -0.41
Gli1P47806 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gli1P47806 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.51□□□□□ -0.41
Gli1P47806 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.51□□□□□ -0.41
Gli1P47806 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.51□□□□□ -0.41
Gli1P47806 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gli1P47806 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Gm19931-201ENSMUST00000198920 368 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.51□□□□□ -0.41
Gli1P47806 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.51□□□□□ -0.41
Gli1P47806 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gli1P47806 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gli1P47806 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gli1P47806 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.5□□□□□ -0.41
Gli1P47806 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gli1P47806 Mir1247-201ENSMUST00000116706 82 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Gm12928-201ENSMUST00000117115 573 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Gm11814-201ENSMUST00000119515 929 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Gm14660-201ENSMUST00000119809 575 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.5□□□□□ -0.41
Gli1P47806 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.5□□□□□ -0.41
Gli1P47806 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Gm8652-201ENSMUST00000181363 964 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Gm2495-201ENSMUST00000191160 466 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Gm24447-201ENSMUST00000083977 338 ntBASIC12.5□□□□□ -0.41
Gli1P47806 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gli1P47806 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gli1P47806 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms