Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm44126-201ENSMUST00000204831 514 ntBASIC12.39□□□□□ -0.43
Sox18P43680 Gm44551-201ENSMUST00000208804 171 ntBASIC12.39□□□□□ -0.43
Sox18P43680 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.39□□□□□ -0.43
Sox18P43680 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC12.39□□□□□ -0.43
Sox18P43680 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox18P43680 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox18P43680 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox18P43680 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sox18P43680 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox18P43680 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.39□□□□□ -0.43
Sox18P43680 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox18P43680 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Sox18P43680 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox18P43680 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Gm15131-201ENSMUST00000119124 595 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox18P43680 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Gm32025-201ENSMUST00000217960 307 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Spcs1-203ENSMUST00000226374 592 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox18P43680 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.38□□□□□ -0.43
Sox18P43680 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox18P43680 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox18P43680 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Sox18P43680 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.37□□□□□ -0.43
Sox18P43680 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.37□□□□□ -0.43
Sox18P43680 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms