Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh4P39038 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.28□□□□□ -0.44
Cdh4P39038 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh4P39038 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.28□□□□□ -0.44
Cdh4P39038 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh4P39038 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh4P39038 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh4P39038 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh4P39038 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh4P39038 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh4P39038 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.27□□□□□ -0.44
Cdh4P39038 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh4P39038 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Cdh4P39038 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdh4P39038 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.27□□□□□ -0.45
Cdh4P39038 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cdh4P39038 Gm14704-201ENSMUST00000120300 874 ntBASIC12.27□□□□□ -0.45
Cdh4P39038 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.27□□□□□ -0.45
Cdh4P39038 Gm22121-201ENSMUST00000175148 54 ntBASIC12.27□□□□□ -0.45
Cdh4P39038 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh4P39038 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.27□□□□□ -0.45
Cdh4P39038 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.27□□□□□ -0.45
Cdh4P39038 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cdh4P39038 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cdh4P39038 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh4P39038 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Cdh4P39038 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdh4P39038 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdh4P39038 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Gm25927-201ENSMUST00000175058 117 ntBASIC12.26□□□□□ -0.45
Cdh4P39038 Gm8099-201ENSMUST00000200510 742 ntBASIC12.26□□□□□ -0.45
Cdh4P39038 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.26□□□□□ -0.45
Cdh4P39038 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.26□□□□□ -0.45
Cdh4P39038 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Cdh4P39038 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Cdh4P39038 Snora73a-201ENSMUST00000082453 205 ntBASIC12.26□□□□□ -0.45
Cdh4P39038 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cdh4P39038 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdh4P39038 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cdh4P39038 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh4P39038 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh4P39038 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh4P39038 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms