Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Gm14660-201ENSMUST00000119809 575 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Gm8062-201ENSMUST00000139696 444 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.76□□□□□ -0.37
LdlrP35951 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.76□□□□□ -0.37
LdlrP35951 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
LdlrP35951 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Gm26315-201ENSMUST00000083890 321 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.76□□□□□ -0.37
LdlrP35951 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.76□□□□□ -0.37
LdlrP35951 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LdlrP35951 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LdlrP35951 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Gm11814-201ENSMUST00000119515 929 ntBASIC12.75□□□□□ -0.37
LdlrP35951 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.75□□□□□ -0.37
LdlrP35951 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.75□□□□□ -0.37
LdlrP35951 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LdlrP35951 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.75□□□□□ -0.37
LdlrP35951 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.75□□□□□ -0.37
LdlrP35951 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.75□□□□□ -0.37
LdlrP35951 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.75□□□□□ -0.37
LdlrP35951 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.75□□□□□ -0.37
LdlrP35951 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.75□□□□□ -0.37
LdlrP35951 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.75□□□□□ -0.37
LdlrP35951 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LdlrP35951 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LdlrP35951 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.74□□□□□ -0.37
LdlrP35951 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LdlrP35951 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.74□□□□□ -0.37
LdlrP35951 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.74□□□□□ -0.37
LdlrP35951 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Gm17420-201ENSMUST00000164753 153 ntBASIC12.74□□□□□ -0.37
LdlrP35951 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.74□□□□□ -0.37
LdlrP35951 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LdlrP35951 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms