Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Thbs1P35441 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.89□□□□□ -0.51
Thbs1P35441 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.89□□□□□ -0.51
Thbs1P35441 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs1P35441 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Thbs1P35441 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Thbs1P35441 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs1P35441 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs1P35441 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Thbs1P35441 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Thbs1P35441 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Thbs1P35441 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Thbs1P35441 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.88□□□□□ -0.51
Thbs1P35441 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.88□□□□□ -0.51
Thbs1P35441 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Mir1894-201ENSMUST00000122802 81 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Thbs1P35441 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs1P35441 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs1P35441 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.88□□□□□ -0.51
Thbs1P35441 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.88□□□□□ -0.51
Thbs1P35441 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs1P35441 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.87□□□□□ -0.51
Thbs1P35441 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Gm11803-201ENSMUST00000119966 444 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Gm2231-201ENSMUST00000125661 612 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm24196-201ENSMUST00000179161 110 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Gm37497-201ENSMUST00000195830 798 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm8099-201ENSMUST00000200510 742 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Thbs1P35441 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Gm10012-201ENSMUST00000078252 192 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Mir339-201ENSMUST00000083659 96 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Gm5356-201ENSMUST00000093326 615 ntBASIC11.87□□□□□ -0.51
Thbs1P35441 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms