Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Gm18165-201ENSMUST00000217426 928 ntBASIC17.24■□□□□ 0.35
CenpbP27790 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC17.24■□□□□ 0.35
CenpbP27790 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CenpbP27790 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.24■□□□□ 0.35
CenpbP27790 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.24■□□□□ 0.35
CenpbP27790 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CenpbP27790 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CenpbP27790 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CenpbP27790 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.23■□□□□ 0.35
CenpbP27790 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Gm11745-201ENSMUST00000121669 448 ntBASIC17.23■□□□□ 0.35
CenpbP27790 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.23■□□□□ 0.35
CenpbP27790 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC17.23■□□□□ 0.35
CenpbP27790 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.23■□□□□ 0.35
CenpbP27790 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CenpbP27790 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CenpbP27790 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CenpbP27790 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CenpbP27790 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Gm37230-201ENSMUST00000194491 818 ntBASIC17.22■□□□□ 0.35
CenpbP27790 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.22■□□□□ 0.35
CenpbP27790 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.22■□□□□ 0.35
CenpbP27790 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CenpbP27790 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CenpbP27790 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CenpbP27790 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CenpbP27790 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CenpbP27790 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CenpbP27790 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Gm44826-201ENSMUST00000207648 2332 ntBASIC17.21■□□□□ 0.35
CenpbP27790 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC17.21■□□□□ 0.35
CenpbP27790 BC043934-202ENSMUST00000185694 2356 ntBASIC17.21■□□□□ 0.35
CenpbP27790 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CenpbP27790 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CenpbP27790 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms