Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.17□□□□□ -0.3
Nfkb1P25799 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm20482-202ENSMUST00000174729 825 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm18056-201ENSMUST00000207670 568 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm18061-201ENSMUST00000208350 562 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm18063-201ENSMUST00000208529 568 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm18052-201ENSMUST00000208750 559 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.16□□□□□ -0.3
Nfkb1P25799 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
Nfkb1P25799 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nfkb1P25799 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Nfkb1P25799 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm11222-201ENSMUST00000119005 738 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm15808-201ENSMUST00000119046 604 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm12291-201ENSMUST00000121627 311 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.15□□□□□ -0.3
Nfkb1P25799 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 Gm6082-201ENSMUST00000215204 454 ntBASIC13.15□□□□□ -0.3
Nfkb1P25799 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nfkb1P25799 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Nfkb1P25799 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.15□□□□□ -0.31
Nfkb1P25799 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Nfkb1P25799 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms