Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.81□□□□□ -0.04
Col1a1P11087 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.81□□□□□ -0.04
Col1a1P11087 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col1a1P11087 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col1a1P11087 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col1a1P11087 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col1a1P11087 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col1a1P11087 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Col1a1P11087 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.8□□□□□ -0.04
Col1a1P11087 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.8□□□□□ -0.04
Col1a1P11087 Gm43184-201ENSMUST00000197247 542 ntBASIC14.8□□□□□ -0.04
Col1a1P11087 Gm6905-201ENSMUST00000205729 511 ntBASIC14.8□□□□□ -0.04
Col1a1P11087 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col1a1P11087 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.8□□□□□ -0.04
Col1a1P11087 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col1a1P11087 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Col1a1P11087 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.79□□□□□ -0.04
Col1a1P11087 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.79□□□□□ -0.04
Col1a1P11087 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm18304-201ENSMUST00000189162 546 ntBASIC14.79□□□□□ -0.04
Col1a1P11087 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.79□□□□□ -0.04
Col1a1P11087 Gm44958-201ENSMUST00000203734 736 ntBASIC14.79□□□□□ -0.04
Col1a1P11087 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.79□□□□□ -0.04
Col1a1P11087 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm5455-201ENSMUST00000058710 715 ntBASIC14.79□□□□□ -0.04
Col1a1P11087 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col1a1P11087 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.79□□□□□ -0.04
Col1a1P11087 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.78□□□□□ -0.04
Col1a1P11087 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.78□□□□□ -0.04
Col1a1P11087 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.78□□□□□ -0.04
Col1a1P11087 Gm10774-201ENSMUST00000188689 204 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Gm19287-201ENSMUST00000203190 358 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.78□□□□□ -0.04
Col1a1P11087 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.78□□□□□ -0.04
Col1a1P11087 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col1a1P11087 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Col1a1P11087 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms