Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Col4a1P02463 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.42■□□□□ 0.06
Col4a1P02463 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col4a1P02463 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.41■□□□□ 0.06
Col4a1P02463 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Gm5733-201ENSMUST00000190232 939 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Gm18038-201ENSMUST00000197900 485 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm1821-202ENSMUST00000227415 750 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Col4a1P02463 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm12501-201ENSMUST00000119163 529 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Gm15432-201ENSMUST00000121106 195 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.41■□□□□ 0.06
Col4a1P02463 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col4a1P02463 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.41■□□□□ 0.06
Col4a1P02463 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col4a1P02463 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.4■□□□□ 0.06
Col4a1P02463 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.4■□□□□ 0.06
Col4a1P02463 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Col4a1P02463 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Col4a1P02463 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Acot6-202ENSMUST00000222921 3622 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Gm15782-201ENSMUST00000121073 445 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.4■□□□□ 0.06
Col4a1P02463 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Gm8365-201ENSMUST00000197334 648 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.4■□□□□ 0.06
Col4a1P02463 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Ginm1-202ENSMUST00000065124 300 ntBASIC15.4■□□□□ 0.06
Col4a1P02463 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col4a1P02463 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col4a1P02463 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col4a1P02463 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col4a1P02463 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col4a1P02463 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms