Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
P01788 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.1□□□□□ -0.79
P01788 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
P01788 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Gm5354-201ENSMUST00000182417 973 ntBASIC10.1□□□□□ -0.79
P01788 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.1□□□□□ -0.79
P01788 Mir7684-201ENSMUST00000183858 60 ntBASIC10.1□□□□□ -0.79
P01788 Mir8102-201ENSMUST00000184148 139 ntBASIC10.1□□□□□ -0.79
P01788 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.1□□□□□ -0.79
P01788 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.1□□□□□ -0.79
P01788 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.1□□□□□ -0.79
P01788 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.1□□□□□ -0.79
P01788 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.1□□□□□ -0.79
P01788 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.1□□□□□ -0.79
P01788 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.1□□□□□ -0.79
P01788 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P01788 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P01788 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P01788 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Syt7-204ENSMUST00000223586 1344 ntBASIC10.09□□□□□ -0.79
P01788 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.09□□□□□ -0.79
P01788 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P01788 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P01788 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.09□□□□□ -0.79
P01788 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P01788 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.09□□□□□ -0.79
P01788 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.09□□□□□ -0.79
P01788 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.09□□□□□ -0.79
P01788 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.09□□□□□ -0.79
P01788 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.09□□□□□ -0.79
P01788 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.09□□□□□ -0.79
P01788 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.09□□□□□ -0.79
P01788 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.09□□□□□ -0.79
P01788 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01788 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.09□□□□□ -0.79
P01788 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.09□□□□□ -0.79
P01788 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P01788 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.09□□□□□ -0.79
P01788 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.09□□□□□ -0.79
P01788 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P01788 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P01788 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P01788 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P01788 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms