Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ClppO88696 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ClppO88696 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.57□□□□□ -0.4
ClppO88696 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.57□□□□□ -0.4
ClppO88696 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Gm14350-201ENSMUST00000116642 640 ntBASIC12.57□□□□□ -0.4
ClppO88696 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.57□□□□□ -0.4
ClppO88696 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.57□□□□□ -0.4
ClppO88696 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.57□□□□□ -0.4
ClppO88696 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.57□□□□□ -0.4
ClppO88696 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.57□□□□□ -0.4
ClppO88696 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ClppO88696 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.57□□□□□ -0.4
ClppO88696 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClppO88696 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.57□□□□□ -0.4
ClppO88696 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.56□□□□□ -0.4
ClppO88696 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ClppO88696 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Gm16202-201ENSMUST00000117532 544 ntBASIC12.56□□□□□ -0.4
ClppO88696 Gm13369-201ENSMUST00000119442 987 ntBASIC12.56□□□□□ -0.4
ClppO88696 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.56□□□□□ -0.4
ClppO88696 Gm3961-201ENSMUST00000204425 994 ntBASIC12.56□□□□□ -0.4
ClppO88696 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Gm45880-201ENSMUST00000213041 853 ntBASIC12.56□□□□□ -0.4
ClppO88696 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ClppO88696 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.56□□□□□ -0.4
ClppO88696 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.56□□□□□ -0.4
ClppO88696 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClppO88696 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.56□□□□□ -0.4
ClppO88696 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ClppO88696 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms