Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Rubie-203ENSMUST00000227803 2430 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm27023-201ENSMUST00000182372 285 ntBASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.81□□□□□ -0.68
Cxcl13O55038 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcl13O55038 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl13O55038 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm15547-201ENSMUST00000122152 333 ntBASIC10.8□□□□□ -0.68
Cxcl13O55038 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Cxcl13O55038 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl13O55038 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.8□□□□□ -0.68
Cxcl13O55038 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcl13O55038 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cxcl13O55038 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.8□□□□□ -0.68
Cxcl13O55038 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.8□□□□□ -0.68
Cxcl13O55038 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl13O55038 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl13O55038 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl13O55038 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cxcl13O55038 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl13O55038 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl13O55038 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cxcl13O55038 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.79□□□□□ -0.68
Cxcl13O55038 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms