Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.65□□□□□ -0.55
Matn3O35701 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn3O35701 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn3O35701 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn3O35701 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.64□□□□□ -0.55
Matn3O35701 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.64□□□□□ -0.55
Matn3O35701 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.64□□□□□ -0.55
Matn3O35701 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.64□□□□□ -0.55
Matn3O35701 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Matn3O35701 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.64□□□□□ -0.55
Matn3O35701 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.64□□□□□ -0.55
Matn3O35701 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn3O35701 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Matn3O35701 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn3O35701 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.63□□□□□ -0.55
Matn3O35701 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.63□□□□□ -0.55
Matn3O35701 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.63□□□□□ -0.55
Matn3O35701 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Matn3O35701 Mir6977-201ENSMUST00000184960 64 ntBASIC11.63□□□□□ -0.55
Matn3O35701 Gm29541-201ENSMUST00000191351 678 ntBASIC11.63□□□□□ -0.55
Matn3O35701 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Matn3O35701 Gm10766-202ENSMUST00000194123 606 ntBASIC11.63□□□□□ -0.55
Matn3O35701 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Matn3O35701 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.63□□□□□ -0.55
Matn3O35701 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Matn3O35701 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.63□□□□□ -0.55
Matn3O35701 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms