Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Mir7221-201ENSMUST00000184009 72 ntBASIC11.16□□□□□ -0.62
Atf6bO35451 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm29705-201ENSMUST00000212598 474 ntBASIC11.16□□□□□ -0.62
Atf6bO35451 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.16□□□□□ -0.62
Atf6bO35451 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atf6bO35451 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Atf6bO35451 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6bO35451 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Atf6bO35451 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Atf6bO35451 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.15□□□□□ -0.62
Atf6bO35451 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.15□□□□□ -0.62
Atf6bO35451 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.15□□□□□ -0.62
Atf6bO35451 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.15□□□□□ -0.62
Atf6bO35451 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.15□□□□□ -0.62
Atf6bO35451 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.15□□□□□ -0.62
Atf6bO35451 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.15□□□□□ -0.62
Atf6bO35451 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Gm25857-201ENSMUST00000082788 129 ntBASIC11.15□□□□□ -0.62
Atf6bO35451 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.15□□□□□ -0.62
Atf6bO35451 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6bO35451 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atf6bO35451 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atf6bO35451 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atf6bO35451 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atf6bO35451 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Atf6bO35451 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Atf6bO35451 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Atf6bO35451 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm11425-201ENSMUST00000119608 498 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Gm13123-201ENSMUST00000122173 492 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm4271-201ENSMUST00000174444 973 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.14□□□□□ -0.63
Atf6bO35451 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm18062-201ENSMUST00000208020 547 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Gm18055-201ENSMUST00000208254 547 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm9396-201ENSMUST00000076703 567 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf6bO35451 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Atf6bO35451 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.14□□□□□ -0.63
Atf6bO35451 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms