Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Alx4O35137 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Alx4O35137 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Gm22189-201ENSMUST00000103822 86 ntBASIC11.43□□□□□ -0.58
Alx4O35137 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.43□□□□□ -0.58
Alx4O35137 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Gm15487-201ENSMUST00000122373 465 ntBASIC11.43□□□□□ -0.58
Alx4O35137 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.43□□□□□ -0.58
Alx4O35137 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.43□□□□□ -0.58
Alx4O35137 Gm6983-201ENSMUST00000214912 628 ntBASIC11.43□□□□□ -0.58
Alx4O35137 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Alx4O35137 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.43□□□□□ -0.58
Alx4O35137 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.43□□□□□ -0.58
Alx4O35137 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Alx4O35137 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.42□□□□□ -0.58
Alx4O35137 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.42□□□□□ -0.58
Alx4O35137 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Alx4O35137 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Alx4O35137 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.42□□□□□ -0.58
Alx4O35137 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.42□□□□□ -0.58
Alx4O35137 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.42□□□□□ -0.58
Alx4O35137 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Gm16372-201ENSMUST00000073088 450 ntBASIC11.42□□□□□ -0.58
Alx4O35137 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.42□□□□□ -0.58
Alx4O35137 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Alx4O35137 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.42□□□□□ -0.58
Alx4O35137 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.42□□□□□ -0.58
Alx4O35137 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Alx4O35137 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Alx4O35137 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Alx4O35137 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Alx4O35137 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Alx4O35137 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms