Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trove2O08848 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.17□□□□□ -0.3
Trove2O08848 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trove2O08848 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trove2O08848 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.17□□□□□ -0.3
Trove2O08848 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.17□□□□□ -0.3
Trove2O08848 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.17□□□□□ -0.3
Trove2O08848 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Gm28760-201ENSMUST00000185995 736 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.17□□□□□ -0.3
Trove2O08848 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trove2O08848 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.17□□□□□ -0.3
Trove2O08848 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trove2O08848 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trove2O08848 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Gm15321-201ENSMUST00000121290 288 ntBASIC13.16□□□□□ -0.3
Trove2O08848 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.16□□□□□ -0.3
Trove2O08848 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.16□□□□□ -0.3
Trove2O08848 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.16□□□□□ -0.3
Trove2O08848 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.16□□□□□ -0.3
Trove2O08848 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.16□□□□□ -0.3
Trove2O08848 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trove2O08848 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trove2O08848 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trove2O08848 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trove2O08848 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trove2O08848 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms