Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm17208-201ENSMUST00000168388 535 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm4271-201ENSMUST00000174444 973 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm37042-201ENSMUST00000193816 581 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm7561-201ENSMUST00000211203 886 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Raet1bO08603 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Raet1bO08603 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.36□□□□□ -0.59
Raet1bO08603 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Raet1bO08603 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.36□□□□□ -0.59
Raet1bO08603 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Raet1bO08603 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Raet1bO08603 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.35□□□□□ -0.59
Raet1bO08603 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.35□□□□□ -0.59
Raet1bO08603 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Raet1bO08603 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.35□□□□□ -0.59
Raet1bO08603 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.35□□□□□ -0.59
Raet1bO08603 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Raet1bO08603 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.35□□□□□ -0.59
Raet1bO08603 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Raet1bO08603 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Raet1bO08603 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.34□□□□□ -0.59
Raet1bO08603 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.34□□□□□ -0.59
Raet1bO08603 Gm22121-201ENSMUST00000175148 54 ntBASIC11.34□□□□□ -0.59
Raet1bO08603 Gm29649-201ENSMUST00000185649 419 ntBASIC11.34□□□□□ -0.59
Raet1bO08603 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Raet1bO08603 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms