Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm11531-201ENSMUST00000117614 555 ntBASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm37466-201ENSMUST00000195692 652 ntBASIC12.63□□□□□ -0.39
Srp54bE9PXC0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm5950-201ENSMUST00000213337 772 ntBASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.63□□□□□ -0.39
Srp54bE9PXC0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srp54bE9PXC0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.62□□□□□ -0.39
Srp54bE9PXC0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm16570-201ENSMUST00000161951 436 ntBASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Srp54bE9PXC0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms