Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm13281-201ENSMUST00000120871 567 ntBASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Mir705-201ENSMUST00000102058 82 ntBASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm12418-201ENSMUST00000118116 942 ntBASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm11736-201ENSMUST00000121468 505 ntBASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Gm18561-201ENSMUST00000206027 804 ntBASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm43547-201ENSMUST00000197729 328 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm2566-201ENSMUST00000201267 431 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gm45575-201ENSMUST00000210283 548 ntBASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a3E9PWQ3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm8384-201ENSMUST00000190905 704 ntBASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm12407-201ENSMUST00000180219 324 ntBASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms