Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Gm11779-201ENSMUST00000118541 368 ntBASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Gm17795-201ENSMUST00000214505 757 ntBASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm12887B1AVM1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm12485-201ENSMUST00000119641 291 ntBASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm7774-201ENSMUST00000200064 533 ntBASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms