Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Gm15487-201ENSMUST00000122373 465 ntBASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm11127A7VMS2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.36□□□□□ -0.59
Gm11127A7VMS2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm11127A7VMS2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms