Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm10051-201ENSMUST00000145209 414 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm9555-201ENSMUST00000200908 583 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm32025-201ENSMUST00000217960 307 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Ntng1-201ENSMUST00000051253 327 ntBASIC10.79□□□□□ -0.68
Col6a4A2AX52 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.79□□□□□ -0.68
Col6a4A2AX52 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.79□□□□□ -0.68
Col6a4A2AX52 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.79□□□□□ -0.68
Col6a4A2AX52 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.79□□□□□ -0.68
Col6a4A2AX52 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a4A2AX52 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.78□□□□□ -0.68
Col6a4A2AX52 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a4A2AX52 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms