Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm28760-201ENSMUST00000185995 736 ntBASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm21854-201ENSMUST00000179901 471 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.57□□□□□ -0.88
Trav6n-6A0A075B6B2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms