Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm45612-201ENSMUST00000211320 160 ntBASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav7n-4A0A075B620 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm18733-201ENSMUST00000173950 856 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Mir8117-201ENSMUST00000184773 107 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm2651-201ENSMUST00000203560 838 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav7n-4A0A075B620 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav7n-4A0A075B620 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms