Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.05□□□□□ -0.48
Trim39Q9ESN2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Trim39Q9ESN2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim39Q9ESN2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms