Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt2Q9CZN7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt2Q9CZN7 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.24□□□□□ -0.45
Shmt2Q9CZN7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.24□□□□□ -0.45
Shmt2Q9CZN7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt2Q9CZN7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt2Q9CZN7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms