Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hdhd3Q9CYW4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hdhd3Q9CYW4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hdhd3Q9CYW4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm4875-201ENSMUST00000118257 786 ntBASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm27618-201ENSMUST00000183671 60 ntBASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm5161-201ENSMUST00000075243 853 ntBASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hdhd3Q9CYW4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm5312-201ENSMUST00000203728 547 ntBASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm24447-201ENSMUST00000083977 338 ntBASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hdhd3Q9CYW4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms