Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Gm6888-201ENSMUST00000221983 706 ntBASIC11.87□□□□□ -0.51
Trim13Q9CYB0 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim13Q9CYB0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm4875-201ENSMUST00000118257 786 ntBASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm38294-201ENSMUST00000192831 381 ntBASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim13Q9CYB0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.85□□□□□ -0.51
Trim13Q9CYB0 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.85□□□□□ -0.51
Trim13Q9CYB0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim13Q9CYB0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms