Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim11Q99PQ2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Gm11803-201ENSMUST00000119966 444 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Gm8810-201ENSMUST00000172895 754 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim11Q99PQ2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.6□□□□□ -0.07
Trim11Q99PQ2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim11Q99PQ2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim11Q99PQ2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms