Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trem2Q99NH8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem2Q99NH8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem2Q99NH8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.04□□□□□ -0.32
Trem2Q99NH8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm6091-201ENSMUST00000098307 165 ntBASIC13.04□□□□□ -0.32
Trem2Q99NH8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.04□□□□□ -0.32
Trem2Q99NH8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.04□□□□□ -0.32
Trem2Q99NH8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.04□□□□□ -0.32
Trem2Q99NH8 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Gm29649-201ENSMUST00000185649 419 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Gm38092-201ENSMUST00000195600 653 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.03□□□□□ -0.32
Trem2Q99NH8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem2Q99NH8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trem2Q99NH8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem2Q99NH8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem2Q99NH8 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.02□□□□□ -0.33
Trem2Q99NH8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.02□□□□□ -0.33
Trem2Q99NH8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms