Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gm44069-201ENSMUST00000204898 506 ntBASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gm9996-201ENSMUST00000070359 913 ntBASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col25a1Q99MQ5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Gm37666-201ENSMUST00000194110 866 ntBASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col25a1Q99MQ5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.27□□□□□ -0.28
Col25a1Q99MQ5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm14034-201ENSMUST00000120147 551 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm5257-201ENSMUST00000121823 790 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm17812-201ENSMUST00000204935 318 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms