Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm44545-201ENSMUST00000208262 746 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx6-1Q99MA9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Rprl1-202ENSMUST00000198476 238 ntBASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-1Q99MA9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-1Q99MA9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-1Q99MA9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms