Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 AY036118-201ENSMUST00000200021 923 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm5051-201ENSMUST00000204085 485 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gm10076-201ENSMUST00000073238 384 ntBASIC13.49□□□□□ -0.25
Clp1Q99LI9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clp1Q99LI9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clp1Q99LI9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm13408-201ENSMUST00000119822 798 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm13935-201ENSMUST00000121859 798 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clp1Q99LI9 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.48□□□□□ -0.25
Clp1Q99LI9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms