Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm6152-201ENSMUST00000151704 340 ntBASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vmp1Q99KU0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm4984-201ENSMUST00000115987 360 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm13612-201ENSMUST00000119276 390 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm27839-201ENSMUST00000184242 106 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vmp1Q99KU0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.4□□□□□ -0.43
Vmp1Q99KU0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.39□□□□□ -0.43
Vmp1Q99KU0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms